Difference between revisions of "SJ09285"

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(Created page with "Category:gene == Gene SJ05942 == * transcription-direction: ** positive * right-end-position: ** 31520 * left-end-position: ** 3739 * centisome-position: ** 4.3343186...")
(Created page with "Category:gene == Gene SJ09285 == * transcription-direction: ** positive * right-end-position: ** 299387 * left-end-position: ** 297649 * centisome-position: ** 70.76200...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05942 ==
+
== Gene SJ09285 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 31520
+
** 299387
 
* left-end-position:
 
* left-end-position:
−
** 3739
+
** 297649
 
* centisome-position:
 
* centisome-position:
−
** 4.3343186    
+
** 70.76200    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ALLOPHANATE-HYDROLASE-RXN]]
+
* [[APIGNAR-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[UREASE-RXN]]
+
* [[CHALCONE-ISOMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-3221]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7647]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5703]]
+
* [[PWY1F-FLAVSYN]]
−
** '''1''' reactions found over '''3''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5169]]
+
* [[PWY-6787]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7397]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7897]]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-2002]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6325]]
 
** '''1''' reactions found over '''5''' reactions in the full pathway
 
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5704]]
+
* [[PWY-5059]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=31520}}
+
{{#set: right-end-position=299387}}
−
{{#set: left-end-position=3739}}
+
{{#set: left-end-position=297649}}
−
{{#set: centisome-position=4.3343186   }}
+
{{#set: centisome-position=70.76200   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:10, 18 March 2021

Gene SJ09285

  • transcription-direction:
    • positive
  • right-end-position:
    • 299387
  • left-end-position:
    • 297649
  • centisome-position:
    • 70.76200

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7897
    • 3 reactions found over 15 reactions in the full pathway
  • PWY-2002
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6325
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5059
    • 3 reactions found over 5 reactions in the full pathway




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