Difference between revisions of "SJ09304"
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(Created page with "Category:gene == Gene SJ10238 == * transcription-direction: ** positive * right-end-position: ** 224950 * left-end-position: ** 213976 * centisome-position: ** 54.269512...") |
(Created page with "Category:gene == Gene SJ06544 == * transcription-direction: ** negative * right-end-position: ** 134150 * left-end-position: ** 122799 * centisome-position: ** 25.96069...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ06544 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 134150 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 122799 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 25.96069 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[AAL_LPAREN_fum_RPAREN_]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[AIAL]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[AICARSYN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | ** Category: [[ | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a |
| − | *** source: [[ | + | * [[AMPSYN-RXN]] |
| − | * [[ | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-6123]] |
| − | ** ''' | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6124]] |
| − | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7234]] |
| − | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7219]] |
| − | ** ''' | + | ** '''4''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: right-end-position= | + | {{#set: right-end-position=134150}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=122799}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=25.96069 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
{{#set: nb pathway associated=4}} | {{#set: nb pathway associated=4}} | ||
Revision as of 14:22, 26 August 2019
Contents
Gene SJ06544
- transcription-direction:
- negative
- right-end-position:
- 134150
- left-end-position:
- 122799
- centisome-position:
- 25.96069
Organism(s) associated with this gene
Reaction(s) associated
- AAL_LPAREN_fum_RPAREN_
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- AIAL
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- AICARSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- AMPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6123
- 4 reactions found over 6 reactions in the full pathway
- PWY-6124
- 5 reactions found over 5 reactions in the full pathway
- PWY-7234
- 3 reactions found over 6 reactions in the full pathway
- PWY-7219
- 4 reactions found over 3 reactions in the full pathway
