Difference between revisions of "SJ09331"

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(Created page with "Category:gene == Gene SJ16590 == * transcription-direction: ** negative * right-end-position: ** 202222 * left-end-position: ** 197712 * centisome-position: ** 28.929583...")
(Created page with "Category:gene == Gene SJ09331 == * transcription-direction: ** positive * right-end-position: ** 41544 * left-end-position: ** 23273 * centisome-position: ** 55.376305...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16590 ==
+
== Gene SJ09331 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 202222
+
** 41544
 
* left-end-position:
 
* left-end-position:
−
** 197712
+
** 23273
 
* centisome-position:
 
* centisome-position:
−
** 28.929583    
+
** 55.376305    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]]
+
* [[3.1.3.66-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-13721]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-6384]]
+
* [[RXN-10959]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10960]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN1K-87]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[VALDEG-PWY]]
+
* [[PWY-6368]]
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-3941]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=41544}}
−
* [[PWY-7574]]
+
{{#set: left-end-position=23273}}
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=55.376305   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=202222}}
 
−
{{#set: left-end-position=197712}}
 
−
{{#set: centisome-position=28.929583   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:04, 18 March 2021

Gene SJ09331

  • transcription-direction:
    • positive
  • right-end-position:
    • 41544
  • left-end-position:
    • 23273
  • centisome-position:
    • 55.376305

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6368
    • 6 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09331&oldid=133219"