Difference between revisions of "SJ09367"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ01769 == * transcription-direction: ** negative * right-end-position: ** 101702 * left-end-position: ** 91920 * centisome-position: ** 62.95114...")
(Created page with "Category:gene == Gene SJ09367 == * transcription-direction: ** positive * right-end-position: ** 440879 * left-end-position: ** 428049 * centisome-position: ** 52.15931...")
 
(4 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01769 ==
+
== Gene SJ09367 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 101702
+
** 440879
 
* left-end-position:
 
* left-end-position:
−
** 91920
+
** 428049
 
* centisome-position:
 
* centisome-position:
−
** 62.95114    
+
** 52.15931    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PEROXID-RXN]]
+
* [[RXN-10642]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14240]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-15288]]
+
* [[UROGENDECARBOX-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-17352]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8635]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
* [[HEMESYN2-PWY]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7445]]
+
* [[PWY0-1415]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-7766]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''3''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[CHLOROPHYLL-SYN]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[HEME-BIOSYNTHESIS-II]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5461]]
+
* [[PWY-5531]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-7159]]
−
{{#set: right-end-position=101702}}
+
** '''5''' reactions found over '''9''' reactions in the full pathway
−
{{#set: left-end-position=91920}}
+
{{#set: transcription-direction=positive}}
−
{{#set: centisome-position=62.95114   }}
+
{{#set: right-end-position=440879}}
 +
{{#set: left-end-position=428049}}
 +
{{#set: centisome-position=52.15931   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=7}}

Latest revision as of 11:02, 18 March 2021

Gene SJ09367

  • transcription-direction:
    • positive
  • right-end-position:
    • 440879
  • left-end-position:
    • 428049
  • centisome-position:
    • 52.15931

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HEMESYN2-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY0-1415
    • 5 reactions found over n.a reactions in the full pathway
  • PWY-7766
    • 3 reactions found over 5 reactions in the full pathway
  • CHLOROPHYLL-SYN
    • 6 reactions found over 9 reactions in the full pathway
  • HEME-BIOSYNTHESIS-II
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-5531
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-7159
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09367&oldid=132721"