Difference between revisions of "SJ09368"

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(Created page with "Category:gene == Gene SJ07228 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-8025 ** Category:...")
(Created page with "Category:gene == Gene SJ09368 == * transcription-direction: ** negative * right-end-position: ** 462223 * left-end-position: ** 449692 * centisome-position: ** 54.79658...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07228 ==
+
== Gene SJ09368 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 462223
 +
* left-end-position:
 +
** 449692
 +
* centisome-position:
 +
** 54.79658   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-8025]]
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* [[ATPASE-RXN]]
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** Category: [[manual]]
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** Category: [[annotation]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8026]]
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN1F-152]]
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* [[RXN-12195]]
−
** Category: [[manual]]
+
** Category: [[annotation]]
−
*** source: [[sjap]]; tool: [[unknown-tool]]; comment: transformation of diatoxanthin into diadinoxanthin (second cycle of xanthophylls)
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[UNSPECIFIC-MONOOXYGENASE-RXN]]
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* [[RXN-12196]]
−
** Category: [[orthology]]
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** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7638]]
+
* [[PWY-6545]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5944]]
+
* [[PWY-7210]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5288]]
+
* [[PWY-7198]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7184]]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=462223}}
 +
{{#set: left-end-position=449692}}
 +
{{#set: centisome-position=54.79658    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:07, 18 March 2021

Gene SJ09368

  • transcription-direction:
    • negative
  • right-end-position:
    • 462223
  • left-end-position:
    • 449692
  • centisome-position:
    • 54.79658

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09368&oldid=134814"