Difference between revisions of "SJ09370"

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(Created page with "Category:gene == Gene SJ09370 == * transcription-direction: ** negative * right-end-position: ** 487330 * left-end-position: ** 478266 * centisome-position: ** 58.27843...")
(Created page with "Category:gene == Gene SJ00305 == * transcription-direction: ** positive * right-end-position: ** 31125 * left-end-position: ** 23766 * centisome-position: ** 4.1788945...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09370 ==
+
== Gene SJ00305 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 487330
+
** 31125
 
* left-end-position:
 
* left-end-position:
−
** 478266
+
** 23766
 
* centisome-position:
 
* centisome-position:
−
** 58.27843    
+
** 4.1788945    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-10642]]
+
* [[3.4.23.5-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=31125}}
−
* [[UROGENDECARBOX-RXN]]
+
{{#set: left-end-position=23766}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=4.1788945   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[PWY-7766]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[CHLOROPHYLL-SYN]]
 
−
** '''6''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEME-BIOSYNTHESIS-II]]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1415]]
 
−
** '''5''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5531]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[HEMESYN2-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7159]]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=487330}}
 
−
{{#set: left-end-position=478266}}
 
−
{{#set: centisome-position=58.27843   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=7}}
 

Revision as of 08:23, 15 March 2021

Gene SJ00305

  • transcription-direction:
    • positive
  • right-end-position:
    • 31125
  • left-end-position:
    • 23766
  • centisome-position:
    • 4.1788945

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09370&oldid=123494"