Difference between revisions of "SJ09372"

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(Created page with "Category:gene == Gene SJ09372 == == Organism(s) associated with this gene == * S.japonica_sterols_curated == Reaction(s) associated == * GLYOXIII-RXN ** Category:...")
(Created page with "Category:gene == Gene SJ11815 == * transcription-direction: ** negative * right-end-position: ** 318368 * left-end-position: ** 310584 * centisome-position: ** 84.72521...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ09372 ==
+
== Gene SJ11815 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 318368
 +
* left-end-position:
 +
** 310584
 +
* centisome-position:
 +
** 84.72521   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GLYOXIII-RXN]]
+
* [[6PGLUCONDEHYDROG-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PYRROLINECARBREDUCT-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: organism associated=S.japonica_sterols_curated}}
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* [[RXN-9952]]
−
{{#set: nb reaction associated=1}}
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-546]]
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** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[P122-PWY]]
 +
** '''16''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-3341]]
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** '''4''' reactions found over '''3''' reactions in the full pathway
 +
* [[PROSYN-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6344]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-4981]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[ARG-PRO-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[OXIDATIVEPENT-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=318368}}
 +
{{#set: left-end-position=310584}}
 +
{{#set: centisome-position=84.72521    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=7}}

Revision as of 14:46, 5 January 2021

Gene SJ11815

  • transcription-direction:
    • negative
  • right-end-position:
    • 318368
  • left-end-position:
    • 310584
  • centisome-position:
    • 84.72521

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • PWY-3341
    • 4 reactions found over 3 reactions in the full pathway
  • PROSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6344
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-4981
    • 3 reactions found over 6 reactions in the full pathway
  • ARG-PRO-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • OXIDATIVEPENT-PWY
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09372&oldid=54697"