Difference between revisions of "SJ09403"

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(Created page with "Category:gene == Gene SJ05276 == * transcription-direction: ** negative * right-end-position: ** 71267 * left-end-position: ** 70398 * centisome-position: ** 74.45978...")
(Created page with "Category:gene == Gene SJ03139 == * transcription-direction: ** negative * right-end-position: ** 359954 * left-end-position: ** 342918 * centisome-position: ** 64.716896...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05276 ==
+
== Gene SJ03139 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 71267
+
** 359954
 
* left-end-position:
 
* left-end-position:
−
** 70398
+
** 342918
 
* centisome-position:
 
* centisome-position:
−
** 74.45978    
+
** 64.716896    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
+
* [[3.2.1.23-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
+
* [[BETAGALACTOSID-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[HBNOm]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RETINOL-DEHYDROGENASE-RXN]]
+
* [[KETOLACTOSE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12581]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12398]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-17728]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]]
+
* [[RXN-12399]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12400]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-368]]
+
* [[BGALACT-PWY]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[PWY66-367]]
+
* [[LACTOSEUTIL-PWY]]
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY66-380]]
+
* [[PWY-6807]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-6872]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7782]]
 
−
** '''11''' reactions found over '''16''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=71267}}
+
{{#set: right-end-position=359954}}
−
{{#set: left-end-position=70398}}
+
{{#set: left-end-position=342918}}
−
{{#set: centisome-position=74.45978   }}
+
{{#set: centisome-position=64.716896   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}

Revision as of 09:26, 27 August 2019

Gene SJ03139

  • transcription-direction:
    • negative
  • right-end-position:
    • 359954
  • left-end-position:
    • 342918
  • centisome-position:
    • 64.716896

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • BGALACT-PWY
    • 1 reactions found over 1 reactions in the full pathway
  • LACTOSEUTIL-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6807
    • 3 reactions found over 8 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09403&oldid=31520"