Difference between revisions of "SJ09406"
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(Created page with "Category:gene == Gene SJ13486 == * transcription-direction: ** positive * right-end-position: ** 7446 * left-end-position: ** 632 * centisome-position: ** 5.0555954 ==...") |
(Created page with "Category:gene == Gene SJ04040 == * transcription-direction: ** negative * right-end-position: ** 90084 * left-end-position: ** 63090 * centisome-position: ** 56.176872...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ04040 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 90084 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 63090 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 56.176872 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[2.7.10.1-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[2.7.12.1-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[PROTEIN-KINASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-14906]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[ | + | * [[RXN-8443]] |
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | + | * [[PWY-5381]] | |
| − | + | ** '''6''' reactions found over '''11''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=negative}} | |
| − | + | {{#set: right-end-position=90084}} | |
| − | * [[PWY- | + | {{#set: left-end-position=63090}} |
| − | + | {{#set: centisome-position=56.176872 }} | |
| − | |||
| − | |||
| − | |||
| − | ** ''' | ||
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Revision as of 18:47, 14 January 2021
Contents
Gene SJ04040
- transcription-direction:
- negative
- right-end-position:
- 90084
- left-end-position:
- 63090
- centisome-position:
- 56.176872
Organism(s) associated with this gene
Reaction(s) associated
- 2.7.10.1-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.7.12.1-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- PROTEIN-KINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-14906
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-8443
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5381
- 6 reactions found over 11 reactions in the full pathway
