Difference between revisions of "SJ09408"

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(Created page with "Category:gene == Gene SJ17964 == * transcription-direction: ** positive * right-end-position: ** 3293 * left-end-position: ** 13 * centisome-position: ** 0.38922158 ==...")
(Created page with "Category:gene == Gene SJ20675 == * transcription-direction: ** positive * right-end-position: ** 11137 * left-end-position: ** 6884 * centisome-position: ** 3.3614595...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17964 ==
+
== Gene SJ20675 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 3293
+
** 11137
 
* left-end-position:
 
* left-end-position:
−
** 13
+
** 6884
 
* centisome-position:
 
* centisome-position:
−
** 0.38922158    
+
** 3.3614595    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[F16ALDOLASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.3.99.5-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[CHOLESTENONE-5-ALPHA-REDUCTASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[CORTISONE-ALPHA-REDUCTASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROGESTERONE-5-ALPHA-REDUCTASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12124]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12267]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8631]]
+
* [[RXN-13682]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-711]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9971]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-343]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6032]]
−
* [[CALVIN-PWY]]
+
** '''1''' reactions found over '''10''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-7455]]
−
* [[GLUCONEO-PWY]]
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-6943]]
−
* [[PWY-7385]]
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-699]]
−
* [[P341-PWY]]
+
** '''3''' reactions found over '''25''' reactions in the full pathway
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-2582]]
−
* [[GLYCOLYSIS]]
+
** '''4''' reactions found over '''21''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-6129]]
−
* [[ANAGLYCOLYSIS-PWY]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[PWY66-378]]
−
* [[PWY66-399]]
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY66-373]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=3293}}
+
{{#set: right-end-position=11137}}
−
{{#set: left-end-position=13}}
+
{{#set: left-end-position=6884}}
−
{{#set: centisome-position=0.38922158   }}
+
{{#set: centisome-position=3.3614595   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=10}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=7}}

Revision as of 14:52, 5 January 2021

Gene SJ20675

  • transcription-direction:
    • positive
  • right-end-position:
    • 11137
  • left-end-position:
    • 6884
  • centisome-position:
    • 3.3614595

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6032
    • 1 reactions found over 10 reactions in the full pathway
  • PWY-7455
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6943
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-699
    • 3 reactions found over 25 reactions in the full pathway
  • PWY-2582
    • 4 reactions found over 21 reactions in the full pathway
  • PWY-6129
    • 3 reactions found over 4 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09408&oldid=58124"