Difference between revisions of "SJ09429"

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(Created page with "Category:gene == Gene SJ19412 == * transcription-direction: ** negative * right-end-position: ** 119670 * left-end-position: ** 113189 * centisome-position: ** 17.853914...")
 
(Created page with "Category:gene == Gene SJ09429 == * transcription-direction: ** positive * right-end-position: ** 33557 * left-end-position: ** 14777 * centisome-position: ** 35.78139...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19412 ==
+
== Gene SJ09429 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 119670
+
** 33557
 
* left-end-position:
 
* left-end-position:
−
** 113189
+
** 14777
 
* centisome-position:
 
* centisome-position:
−
** 17.853914    
+
** 35.78139    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[NADH-DEHYDROG-A-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
+
* [[ATPSYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NADH-DEHYDROGENASE-RXN]]
+
* [[RXN-12196]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5330]]
+
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-7219]]
−
* [[PWY0-1335]]
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6545]]
−
* [[PWY-4302]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7210]]
−
* [[PWY-3781]]
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
* [[PWY-7198]]
−
* [[PWY0-1334]]
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-7184]]
−
* [[PWY-6692]]
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-5083]]
+
{{#set: right-end-position=33557}}
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
{{#set: left-end-position=14777}}
−
* [[PWY-7279]]
+
{{#set: centisome-position=35.78139   }}
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY0-1573]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-7269]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY0-1568]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY0-1567]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=119670}}
 
−
{{#set: left-end-position=113189}}
 
−
{{#set: centisome-position=17.853914   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:06, 18 March 2021

Gene SJ09429

  • transcription-direction:
    • positive
  • right-end-position:
    • 33557
  • left-end-position:
    • 14777
  • centisome-position:
    • 35.78139

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7219
    • 4 reactions found over 3 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09429&oldid=134593"