Difference between revisions of "SJ09456"

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(Created page with "Category:gene == Gene SJ02923 == * transcription-direction: ** positive * right-end-position: ** 510784 * left-end-position: ** 495267 * centisome-position: ** 93.25499...")
(Created page with "Category:gene == Gene SJ20108 == * transcription-direction: ** negative * right-end-position: ** 178205 * left-end-position: ** 164155 * centisome-position: ** 76.95535...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02923 ==
+
== Gene SJ20108 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 510784
+
** 178205
 
* left-end-position:
 
* left-end-position:
−
** 495267
+
** 164155
 
* centisome-position:
 
* centisome-position:
−
** 93.25499    
+
** 76.95535    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[G5DH]]
+
* [[2.8.2.23-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[G5DHm]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.8.2.29-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUTSEMIALDEHYDROG-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6922]]
+
* [[PWY-6558]]
−
** '''5''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''13''' reactions in the full pathway
−
* [[ARGININE-SYN4-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: right-end-position=178205}}
−
* [[PWY-3341]]
+
{{#set: left-end-position=164155}}
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
{{#set: centisome-position=76.95535   }}
−
* [[PROSYN-PWY]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: nb reaction associated=2}}
−
* [[CITRULBIO-PWY]]
+
{{#set: nb pathway associated=1}}
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=510784}}
 
−
{{#set: left-end-position=495267}}
 
−
{{#set: centisome-position=93.25499   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=5}}
 

Revision as of 14:50, 5 January 2021

Gene SJ20108

  • transcription-direction:
    • negative
  • right-end-position:
    • 178205
  • left-end-position:
    • 164155
  • centisome-position:
    • 76.95535

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09456&oldid=57164"