Difference between revisions of "SJ09465"

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(Created page with "Category:gene == Gene SJ18471 == * transcription-direction: ** negative * right-end-position: ** 230453 * left-end-position: ** 211671 * centisome-position: ** 86.64885...")
(Created page with "Category:gene == Gene SJ14828 == * transcription-direction: ** negative * right-end-position: ** 45178 * left-end-position: ** 41482 * centisome-position: ** 10.336287...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ18471 ==
+
== Gene SJ14828 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
** 230453
+
** 45178
 
* left-end-position:
 
* left-end-position:
** 211671
+
** 41482
 
* centisome-position:
 
* centisome-position:
** 86.64885    
+
** 10.336287    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[ACONITATEDEHYDR-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[ACONITATEHYDR-RXN]]
+
* [[RXN-8443]]
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-14047]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
* [[TCA]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
** '''9''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-6549]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5392]]
 
** '''6''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-5690]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[P105-PWY]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[REDCITCYC]]
 
** '''5''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY66-398]]
 
** '''10''' reactions found over '''10''' reactions in the full pathway
 
* [[PWY-7254]]
 
** '''7''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-6969]]
 
** '''10''' reactions found over '''12''' reactions in the full pathway
 
* [[FERMENTATION-PWY]]
 
** '''11''' reactions found over '''16''' reactions in the full pathway
 
* [[GLYOXYLATE-BYPASS]]
 
** '''6''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5750]]
 
** '''3''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-5913]]
 
** '''10''' reactions found over '''11''' reactions in the full pathway
 
* [[P23-PWY]]
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
* [[PWY-7124]]
 
** '''8''' reactions found over '''8''' reactions in the full pathway
 
* [[PWY-6728]]
 
** '''11''' reactions found over '''19''' reactions in the full pathway
 
</div>
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
{{#set: right-end-position=230453}}
+
{{#set: right-end-position=45178}}
{{#set: left-end-position=211671}}
+
{{#set: left-end-position=41482}}
{{#set: centisome-position=86.64885   }}
+
{{#set: centisome-position=10.336287   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=16}}
+
{{#set: nb pathway associated=1}}

Revision as of 15:22, 5 January 2021

Gene SJ14828

  • transcription-direction:
    • negative
  • right-end-position:
    • 45178
  • left-end-position:
    • 41482
  • centisome-position:
    • 10.336287

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway