Difference between revisions of "SJ09474"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ACTINOMYCIN-D ACTINOMYCIN-D] == * common-name: ** actinomycin d * smiles: ** cc(c)c1(c(=o)n7([c...")
(Created page with "Category:gene == Gene SJ09474 == * transcription-direction: ** negative * right-end-position: ** 17094 * left-end-position: ** 3469 * centisome-position: ** 8.527951 =...")
 
(7 intermediate revisions by 2 users not shown)
Line 1: Line 1:
−
[[Category:metabolite]]
+
[[Category:gene]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ACTINOMYCIN-D ACTINOMYCIN-D] ==
+
== Gene SJ09474 ==
−
* common-name:
+
* transcription-direction:
−
** actinomycin d
+
** negative
−
* smiles:
+
* right-end-position:
−
** cc(c)c1(c(=o)n7([ch](c(n(c)cc(n(c(c(c)c)c(=o)oc(c)c(c(n1)=o)nc(=o)c6(c=cc(c)=c2(c(n=c5(c(o2)=c(c)c(=o)c(n)=c(c(=o)nc4(c(oc(c(c(c)c)n(c)c(=o)cn(c)c(=o)[ch]3(cccn3c(c(c(c)c)nc(=o)4)=o))=o)c))5))=6)))c)=o)=o)ccc7))
+
** 17094
−
* inchi-key:
+
* left-end-position:
−
** rjurfgzvjuqbhk-iixsonldsa-n
+
** 3469
−
* molecular-weight:
+
* centisome-position:
−
** 1255.432
+
** 8.527951   
−
== Reaction(s) known to consume the compound ==
+
== Organism(s) associated with this gene  ==
−
== Reaction(s) known to produce the compound ==
+
* [[S.japonica_carotenoid_curated]]
−
* [[RXN-17067]]
+
== Reaction(s) associated ==
−
== Reaction(s) of unknown directionality ==
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
{{#set: common-name=actinomycin d}}
+
* [[RXN-12587]]
−
{{#set: inchi-key=inchikey=rjurfgzvjuqbhk-iixsonldsa-n}}
+
** Category: [[annotation]]
−
{{#set: molecular-weight=1255.432}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12588]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14382]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14384]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14385]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-14386]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15881]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9787]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-308]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[PWY-6892]]
 +
** '''5''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7250]]
 +
** '''5''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY0-1021]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7892]]
 +
** '''3''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6891]]
 +
** '''4''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7904]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7891]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7889]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7888]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6823]]
 +
** '''7''' reactions found over '''6''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=17094}}
 +
{{#set: left-end-position=3469}}
 +
{{#set: centisome-position=8.527951    }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=9}}
 +
{{#set: nb pathway associated=10}}

Latest revision as of 11:02, 18 March 2021

Gene SJ09474

  • transcription-direction:
    • negative
  • right-end-position:
    • 17094
  • left-end-position:
    • 3469
  • centisome-position:
    • 8.527951

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6892
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-7250
    • 5 reactions found over 10 reactions in the full pathway
  • PWY0-1021
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7892
    • 3 reactions found over 11 reactions in the full pathway
  • PWY-6891
    • 4 reactions found over 7 reactions in the full pathway
  • PWY-7904
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7891
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7889
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7888
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6823
    • 7 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09474&oldid=132684"