Difference between revisions of "SJ09580"

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(Created page with "Category:gene == Gene SJ03013 == * transcription-direction: ** positive * right-end-position: ** 40000 * left-end-position: ** 38883 * centisome-position: ** 30.7699 =...")
(Created page with "Category:gene == Gene SJ00896 == * transcription-direction: ** negative * right-end-position: ** 100484 * left-end-position: ** 84842 * centisome-position: ** 52.93989...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ03013 ==
+
== Gene SJ00896 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 40000
+
** 100484
 
* left-end-position:
 
* left-end-position:
** 38883
+
** 84842
 
* centisome-position:
 
* centisome-position:
** 30.7699    
+
** 52.93989    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[RXN-15556]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: transcription-direction=positive}}
+
** Category: [[orthology]]
{{#set: right-end-position=40000}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
{{#set: left-end-position=38883}}
+
* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
{{#set: centisome-position=30.7699   }}
+
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[PWY-7511]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=100484}}
 +
{{#set: left-end-position=84842}}
 +
{{#set: centisome-position=52.93989   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=1}}

Revision as of 13:07, 14 January 2021

Gene SJ00896

  • transcription-direction:
    • negative
  • right-end-position:
    • 100484
  • left-end-position:
    • 84842
  • centisome-position:
    • 52.93989

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway