Difference between revisions of "SJ09591"

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(Created page with "Category:gene == Gene SJ04705 == * transcription-direction: ** positive * right-end-position: ** 64766 * left-end-position: ** 39351 * centisome-position: ** 38.594925...")
(Created page with "Category:gene == Gene SJ10361 == * transcription-direction: ** negative * right-end-position: ** 486827 * left-end-position: ** 481854 * centisome-position: ** 59.559326...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04705 ==
+
== Gene SJ10361 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 64766
+
** 486827
 
* left-end-position:
 
* left-end-position:
−
** 39351
+
** 481854
 
* centisome-position:
 
* centisome-position:
−
** 38.594925    
+
** 59.559326    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.4.17-RXN]]
+
* [[3-CH3-2-OXOBUTANOATE-OH-CH3-XFER-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5038]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[KETOPANTOALDOLASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[MOHMT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[MTMOHT]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15635]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=64766}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=39351}}
+
== Pathway(s) associated ==
−
{{#set: centisome-position=38.594925   }}
+
* [[PANTO-PWY]]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6654]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=486827}}
 +
{{#set: left-end-position=481854}}
 +
{{#set: centisome-position=59.559326   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=2}}

Revision as of 13:03, 14 January 2021

Gene SJ10361

  • transcription-direction:
    • negative
  • right-end-position:
    • 486827
  • left-end-position:
    • 481854
  • centisome-position:
    • 59.559326

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PANTO-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-6654
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09591&oldid=82361"