Difference between revisions of "SJ09609"

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(Created page with "Category:gene == Gene SJ05827 == * transcription-direction: ** positive * right-end-position: ** 320988 * left-end-position: ** 286400 * centisome-position: ** 58.91719...")
(Created page with "Category:gene == Gene SJ09609 == * transcription-direction: ** negative * right-end-position: ** 118815 * left-end-position: ** 109612 * centisome-position: ** 26.756691...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05827 ==
+
== Gene SJ09609 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 320988
+
** 118815
 
* left-end-position:
 
* left-end-position:
−
** 286400
+
** 109612
 
* centisome-position:
 
* centisome-position:
−
** 58.91719    
+
** 26.756691    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[N-ACETYLTRANSFER-RXN]]
+
* [[2.7.10.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.7.12.1-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN0-6948]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PROTEIN-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-14906]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5154]]
+
* [[PWY-5381]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
* [[ARGSYNBSUB-PWY]]
+
{{#set: transcription-direction=negative}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=118815}}
−
* [[GLUTORN-PWY]]
+
{{#set: left-end-position=109612}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=26.756691   }}
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=320988}}
 
−
{{#set: left-end-position=286400}}
 
−
{{#set: centisome-position=58.91719   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=3}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:08, 18 March 2021

Gene SJ09609

  • transcription-direction:
    • negative
  • right-end-position:
    • 118815
  • left-end-position:
    • 109612
  • centisome-position:
    • 26.756691

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09609&oldid=135195"