Difference between revisions of "SJ09694"

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(Created page with "Category:gene == Gene SJ04919 == * transcription-direction: ** positive * right-end-position: ** 35449 * left-end-position: ** 16745 * centisome-position: ** 17.082027...")
(Created page with "Category:gene == Gene SJ09694 == * transcription-direction: ** negative * right-end-position: ** 21027 * left-end-position: ** 15741 * centisome-position: ** 42.13668...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04919 ==
+
== Gene SJ09694 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 35449
+
** 21027
 
* left-end-position:
 
* left-end-position:
−
** 16745
+
** 15741
 
* centisome-position:
 
* centisome-position:
−
** 17.082027    
+
** 42.13668    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[FRUCTOKINASE-RXN]]
+
* [[RXN-11783]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[GLUCOKIN-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11989]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[HEXOKINASE-RXN]]
+
* [[RXN-11999]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[MANNKIN-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6681]]
−
* [[PWY-3801]]
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-621]]
+
{{#set: right-end-position=21027}}
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
{{#set: left-end-position=15741}}
−
* [[P122-PWY]]
+
{{#set: centisome-position=42.13668   }}
−
** '''16''' reactions found over '''18''' reactions in the full pathway
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
* [[PWY-4101]]
+
{{#set: nb reaction associated=3}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: nb pathway associated=1}}
−
* [[PWY-5384]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[SUCROSEUTIL2-PWY]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6531]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
* [[SUCUTIL-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-2723]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY0-1182]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5661]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[GLYCOCAT-PWY]]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7238]]
 
−
** '''5''' reactions found over '''8''' reactions in the full pathway
 
−
* [[P124-PWY]]
 
−
** '''12''' reactions found over '''15''' reactions in the full pathway
 
−
* [[GLUCOSE1PMETAB-PWY]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7385]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-2722]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[TREDEGLOW-PWY]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-5514]]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-3861]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6140]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6992]]
 
−
** '''4''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=35449}}
 
−
{{#set: left-end-position=16745}}
 
−
{{#set: centisome-position=17.082027   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=4}}
 
−
{{#set: nb pathway associated=23}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ09694

  • transcription-direction:
    • negative
  • right-end-position:
    • 21027
  • left-end-position:
    • 15741
  • centisome-position:
    • 42.13668

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6681
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ09694&oldid=134765"