Difference between revisions of "SJ09694"
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(Created page with "Category:gene == Gene SJ10789 == * transcription-direction: ** positive * right-end-position: ** 13375 * left-end-position: ** 9725 * centisome-position: ** 2.535768 =...") |
(Created page with "Category:gene == Gene SJ04919 == * transcription-direction: ** positive * right-end-position: ** 35449 * left-end-position: ** 16745 * centisome-position: ** 17.082027...") |
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Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ04919 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 35449 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 16745 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 17.082027 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
− | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[FRUCTOKINASE-RXN]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[GLUCOKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | ** Category: [[orthology]] | |
− | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
− | + | * [[HEXOKINASE-RXN]] | |
− | |||
− | ** Category: [[ | ||
− | *** source: [[ | ||
− | * [[ | ||
− | |||
− | |||
− | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[MANNKIN-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY- | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
+ | * [[PWY-3801]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-621]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[P122-PWY]] | ||
+ | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
+ | * [[PWY-4101]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-5384]] | ||
+ | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[SUCROSEUTIL2-PWY]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6531]] | ||
+ | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[SUCUTIL-PWY]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-2723]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY0-1182]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-5661]] | ||
+ | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[GLYCOCAT-PWY]] | ||
+ | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[PWY-7238]] | ||
+ | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
+ | * [[P124-PWY]] | ||
+ | ** '''12''' reactions found over '''15''' reactions in the full pathway | ||
+ | * [[GLUCOSE1PMETAB-PWY]] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7385]] | ||
+ | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[PWY-2722]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[TREDEGLOW-PWY]] | ||
** '''1''' reactions found over '''2''' reactions in the full pathway | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[ANAGLYCOLYSIS-PWY]] |
+ | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
+ | * [[PWY-5514]] | ||
+ | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-3861]] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[PWY-6140]] | ||
** '''1''' reactions found over '''4''' reactions in the full pathway | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
− | * [[PWY- | + | * [[PWY-6992]] |
− | ** ''' | + | ** '''4''' reactions found over '''5''' reactions in the full pathway |
− | + | </div> | |
− | |||
− | |||
− | |||
− | |||
− | |||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=35449}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=16745}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=17.082027 }} |
− | {{#set: organism associated=S. | + | {{#set: organism associated=S.japonica_sterols_curated}} |
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=23}} |
Revision as of 20:25, 18 December 2020
Contents
Gene SJ04919
- transcription-direction:
- positive
- right-end-position:
- 35449
- left-end-position:
- 16745
- centisome-position:
- 17.082027
Organism(s) associated with this gene
Reaction(s) associated
- FRUCTOKINASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GLUCOKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- HEXOKINASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- MANNKIN-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-3801
- 4 reactions found over 5 reactions in the full pathway
- PWY-621
- 3 reactions found over 4 reactions in the full pathway
- P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- PWY-4101
- 2 reactions found over 3 reactions in the full pathway
- PWY-5384
- 3 reactions found over 4 reactions in the full pathway
- SUCROSEUTIL2-PWY
- 1 reactions found over 4 reactions in the full pathway
- PWY-6531
- 4 reactions found over 5 reactions in the full pathway
- SUCUTIL-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-2723
- 2 reactions found over 3 reactions in the full pathway
- PWY0-1182
- 2 reactions found over 2 reactions in the full pathway
- PWY-5661
- 2 reactions found over 3 reactions in the full pathway
- GLYCOCAT-PWY
- 6 reactions found over 8 reactions in the full pathway
- PWY-7238
- 5 reactions found over 8 reactions in the full pathway
- P124-PWY
- 12 reactions found over 15 reactions in the full pathway
- GLUCOSE1PMETAB-PWY
- 3 reactions found over 5 reactions in the full pathway
- PWY-7385
- 7 reactions found over 9 reactions in the full pathway
- PWY-2722
- 1 reactions found over 3 reactions in the full pathway
- TREDEGLOW-PWY
- 1 reactions found over 2 reactions in the full pathway
- ANAGLYCOLYSIS-PWY
- 10 reactions found over 11 reactions in the full pathway
- PWY-5514
- 5 reactions found over 7 reactions in the full pathway
- PWY-3861
- 2 reactions found over 4 reactions in the full pathway
- PWY-6140
- 1 reactions found over 4 reactions in the full pathway
- PWY-6992
- 4 reactions found over 5 reactions in the full pathway