Difference between revisions of "SJ09771"

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(Created page with "Category:gene == Gene SJ04851 == * transcription-direction: ** negative * right-end-position: ** 12377 * left-end-position: ** 2540 * centisome-position: ** 2.564465 =...")
 
(Created page with "Category:gene == Gene SJ03418 == * transcription-direction: ** positive * right-end-position: ** 42557 * left-end-position: ** 31756 * centisome-position: ** 26.181662...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04851 ==
+
== Gene SJ03418 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 12377
+
** 42557
 
* left-end-position:
 
* left-end-position:
** 2540
+
** 31756
 
* centisome-position:
 
* centisome-position:
** 2.564465    
+
** 26.181662    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-12720]]
+
* [[TAGAKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[SULFATE-ADENYLYLTRANS-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6932]]
+
* [[GALACTITOLCAT-PWY]]
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
* [[PWY-5278]]
+
* [[PWY-7395]]
** '''2''' reactions found over '''2''' reactions in the full pathway
 
* [[DISSULFRED-PWY]]
 
 
** '''2''' reactions found over '''4''' reactions in the full pathway
 
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[P224-PWY]]
+
* [[PWY-7077]]
 
** '''2''' reactions found over '''5''' reactions in the full pathway
 
** '''2''' reactions found over '''5''' reactions in the full pathway
* [[PWY-6683]]
+
* [[LACTOSECAT-PWY]]
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
* [[SULFMETII-PWY]]
+
{{#set: transcription-direction=positive}}
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=42557}}
* [[PWY-5340]]
+
{{#set: left-end-position=31756}}
** '''2''' reactions found over '''2''' reactions in the full pathway
+
{{#set: centisome-position=26.181662   }}
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=12377}}
 
{{#set: left-end-position=2540}}
 
{{#set: centisome-position=2.564465   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=4}}

Revision as of 14:20, 26 August 2019

Gene SJ03418

  • transcription-direction:
    • positive
  • right-end-position:
    • 42557
  • left-end-position:
    • 31756
  • centisome-position:
    • 26.181662

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GALACTITOLCAT-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7395
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7077
    • 2 reactions found over 5 reactions in the full pathway
  • LACTOSECAT-PWY
    • 2 reactions found over 4 reactions in the full pathway