Difference between revisions of "SJ09771"

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(Created page with "Category:gene == Gene SJ19552 == * transcription-direction: ** negative * right-end-position: ** 263054 * left-end-position: ** 255306 * centisome-position: ** 40.41244...")
(Created page with "Category:gene == Gene SJ16609 == * transcription-direction: ** positive * right-end-position: ** 463112 * left-end-position: ** 452668 * centisome-position: ** 66.235214...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ19552 ==
+
== Gene SJ16609 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 263054
+
** 463112
 
* left-end-position:
 
* left-end-position:
−
** 255306
+
** 452668
 
* centisome-position:
 
* centisome-position:
−
** 40.41244    
+
** 66.235214    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GALACTOKIN-RXN]]
+
* [[RXN-15212]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[SPHINGOMYELIN-PHOSPHODIESTERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UDPGLUCEPIM-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-3821]]
+
* [[PWY3DJ-11281]]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6527]]
+
* [[PWY-7277]]
−
** '''7''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6317]]
+
{{#set: transcription-direction=positive}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=463112}}
−
* [[PWY66-422]]
+
{{#set: left-end-position=452668}}
−
** '''5''' reactions found over '''n.a''' reactions in the full pathway
+
{{#set: centisome-position=66.235214   }}
−
* [[PWY-7344]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
* [[COLANSYN-PWY]]
 
−
** '''6''' reactions found over '''1''' reactions in the full pathway
 
−
* [[PWY-6397]]
 
−
** '''1''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-7328]]
 
−
** '''5''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=263054}}
 
−
{{#set: left-end-position=255306}}
 
−
{{#set: centisome-position=40.41244   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
 
{{#set: nb reaction associated=2}}
 
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=2}}

Revision as of 14:47, 5 January 2021

Gene SJ16609

  • transcription-direction:
    • positive
  • right-end-position:
    • 463112
  • left-end-position:
    • 452668
  • centisome-position:
    • 66.235214

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY3DJ-11281
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-7277
    • 4 reactions found over 3 reactions in the full pathway




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