Difference between revisions of "SJ09771"

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(Created page with "Category:gene == Gene SJ05456 == * transcription-direction: ** positive * right-end-position: ** 90390 * left-end-position: ** 84778 * centisome-position: ** 92.34775...")
(Created page with "Category:gene == Gene SJ19552 == * transcription-direction: ** negative * right-end-position: ** 263054 * left-end-position: ** 255306 * centisome-position: ** 40.41244...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05456 ==
+
== Gene SJ19552 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 90390
+
** 263054
 
* left-end-position:
 
* left-end-position:
−
** 84778
+
** 255306
 
* centisome-position:
 
* centisome-position:
−
** 92.34775    
+
** 40.41244    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.6.4.3-RXN]]
+
* [[GALACTOKIN-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[UDPGLUCEPIM-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PWY-3821]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-6527]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''7''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-6317]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6545]]
+
* [[PWY66-422]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''5''' reactions found over '''n.a''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-7344]]
−
{{#set: right-end-position=90390}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: left-end-position=84778}}
+
* [[COLANSYN-PWY]]
−
{{#set: centisome-position=92.34775   }}
+
** '''6''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-6397]]
 +
** '''1''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-7328]]
 +
** '''5''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=263054}}
 +
{{#set: left-end-position=255306}}
 +
{{#set: centisome-position=40.41244   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=8}}

Revision as of 18:46, 14 January 2021

Gene SJ19552

  • transcription-direction:
    • negative
  • right-end-position:
    • 263054
  • left-end-position:
    • 255306
  • centisome-position:
    • 40.41244

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-3821
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6527
    • 7 reactions found over 7 reactions in the full pathway
  • PWY-6317
    • 5 reactions found over 5 reactions in the full pathway
  • PWY66-422
    • 5 reactions found over n.a reactions in the full pathway
  • PWY-7344
    • 1 reactions found over 1 reactions in the full pathway
  • COLANSYN-PWY
    • 6 reactions found over 1 reactions in the full pathway
  • PWY-6397
    • 1 reactions found over 17 reactions in the full pathway
  • PWY-7328
    • 5 reactions found over 2 reactions in the full pathway




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