Difference between revisions of "SJ09797"

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(Created page with "Category:gene == Gene SJ13978 == * transcription-direction: ** negative * right-end-position: ** 701973 * left-end-position: ** 693897 * centisome-position: ** 95.56823...")
(Created page with "Category:gene == Gene SJ09797 == * transcription-direction: ** positive * right-end-position: ** 26228 * left-end-position: ** 17391 * centisome-position: ** 47.34306...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ13978 ==
+
== Gene SJ09797 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 701973
+
** 26228
 
* left-end-position:
 
* left-end-position:
−
** 693897
+
** 17391
 
* centisome-position:
 
* centisome-position:
−
** 95.56823    
+
** 47.34306    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GSAAMINOTRANS-RXN]]
+
* [[QUERCETIN-3-O-METHYLTRANSFERASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-1104]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1143]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-13935]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
* [[RXN-3422]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5188]]
+
* [[PWY-7161]]
−
** '''6''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''9''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
* [[PWY-6064]]
−
{{#set: right-end-position=701973}}
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
{{#set: left-end-position=693897}}
+
* [[PWY-2181]]
−
{{#set: centisome-position=95.56823   }}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7498]]
 +
** '''2''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7186]]
 +
** '''2''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1121]]
 +
** '''9''' reactions found over '''20''' reactions in the full pathway
 +
* [[PWY-361]]
 +
** '''7''' reactions found over '''15''' reactions in the full pathway
 +
* [[PWY-5168]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7163]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=26228}}
 +
{{#set: left-end-position=17391}}
 +
{{#set: centisome-position=47.34306   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=1}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:03, 18 March 2021

Gene SJ09797

  • transcription-direction:
    • positive
  • right-end-position:
    • 26228
  • left-end-position:
    • 17391
  • centisome-position:
    • 47.34306

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7161
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6064
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-2181
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7498
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-7186
    • 2 reactions found over 12 reactions in the full pathway
  • PWY-1121
    • 9 reactions found over 20 reactions in the full pathway
  • PWY-361
    • 7 reactions found over 15 reactions in the full pathway
  • PWY-5168
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7163
    • 1 reactions found over 4 reactions in the full pathway




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