Difference between revisions of "SJ09824"
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(Created page with "Category:gene == Gene SJ00207 == * transcription-direction: ** positive * right-end-position: ** 340749 * left-end-position: ** 335329 * centisome-position: ** 58.86001...") |
(Created page with "Category:gene == Gene SJ09824 == * transcription-direction: ** negative * right-end-position: ** 28181 * left-end-position: ** 20602 * centisome-position: ** 56.77985...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ09824 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 28181 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 20602 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 56.77985 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[2.4.1. | + | * [[2.4.1.109-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[2.4.1. | + | * [[2.4.1.83-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | + | * [[RXN-16602]] | |
| − | |||
| − | |||
| − | * [[RXN- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7921]] |
| − | ** '''2''' reactions found over ''' | + | ** '''2''' reactions found over '''7''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-7922]] |
| − | ** '''5''' reactions found over ''' | + | ** '''2''' reactions found over '''5''' reactions in the full pathway |
| − | * [[PWY- | + | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]] |
| − | ** ''' | + | ** '''16''' reactions found over '''19''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-7661]] |
| − | {{#set: right-end-position= | + | ** '''1''' reactions found over '''11''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | {{#set: transcription-direction=negative}} |
| − | {{#set: centisome-position= | + | {{#set: right-end-position=28181}} |
| + | {{#set: left-end-position=20602}} | ||
| + | {{#set: centisome-position=56.77985 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=4}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ09824
- transcription-direction:
- negative
- right-end-position:
- 28181
- left-end-position:
- 20602
- centisome-position:
- 56.77985
Organism(s) associated with this gene
Reaction(s) associated
- 2.4.1.109-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- 2.4.1.83-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-16602
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7921
- 2 reactions found over 7 reactions in the full pathway
- PWY-7922
- 2 reactions found over 5 reactions in the full pathway
- MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
- 16 reactions found over 19 reactions in the full pathway
- PWY-7661
- 1 reactions found over 11 reactions in the full pathway
