Difference between revisions of "SJ09862"

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(Created page with "Category:gene == Gene SJ00971 == * transcription-direction: ** positive * right-end-position: ** 103211 * left-end-position: ** 98279 * centisome-position: ** 61.839474...")
(Created page with "Category:gene == Gene SJ09862 == * transcription-direction: ** positive * right-end-position: ** 116427 * left-end-position: ** 82303 * centisome-position: ** 20.336039...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00971 ==
+
== Gene SJ09862 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 103211
+
** 116427
 
* left-end-position:
 
* left-end-position:
−
** 98279
+
** 82303
 
* centisome-position:
 
* centisome-position:
−
** 61.839474    
+
** 20.336039    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[RXN-14249]]
−
* [[DIHYDLIPACETRANS-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[PYRUVDEH-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[THREODEHYD-RXN]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12508]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12583]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-1132]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-1133]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-1134]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
+
* [[PWY-7378]]
−
** '''3''' reactions found over '''1''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-7218]]
+
* [[THREONINE-DEG2-PWY]]
−
** '''7''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5482]]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5537]]
 
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-6886]]
+
* [[THRDLCTCAT-PWY]]
−
** '''8''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7384]]
 
−
** '''6''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PYRUVDEHYD-PWY]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=103211}}
+
{{#set: right-end-position=116427}}
−
{{#set: left-end-position=98279}}
+
{{#set: left-end-position=82303}}
−
{{#set: centisome-position=61.839474   }}
+
{{#set: centisome-position=20.336039   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:09, 18 March 2021

Gene SJ09862

  • transcription-direction:
    • positive
  • right-end-position:
    • 116427
  • left-end-position:
    • 82303
  • centisome-position:
    • 20.336039

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7378
    • 1 reactions found over 4 reactions in the full pathway
  • THREONINE-DEG2-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • THRDLCTCAT-PWY
    • 1 reactions found over 3 reactions in the full pathway




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