Difference between revisions of "SJ09996"

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(Created page with "Category:gene == Gene SJ05283 == * transcription-direction: ** negative * right-end-position: ** 67687 * left-end-position: ** 62093 * centisome-position: ** 65.74932...")
(Created page with "Category:gene == Gene SJ22256 == * transcription-direction: ** positive * right-end-position: ** 208842 * left-end-position: ** 196253 * centisome-position: ** 33.681267...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05283 ==
+
== Gene SJ22256 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 67687
+
** 208842
 
* left-end-position:
 
* left-end-position:
** 62093
+
** 196253
 
* centisome-position:
 
* centisome-position:
** 65.74932    
+
** 33.681267    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.8.23-RXN]]
+
* [[CELLULOSE-SYNTHASE-UDP-FORMING-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ISOCIT-CLEAV-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[PHENOL-BETA-GLUCOSYLTRANSFERASE-RXN]]
* [[RXN-10827]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10828]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6969]]
+
* [[PWY-1001]]
** '''10''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
* [[GLYOXYLATE-BYPASS]]
+
{{#set: transcription-direction=positive}}
** '''6''' reactions found over '''6''' reactions in the full pathway
+
{{#set: right-end-position=208842}}
* [[P105-PWY]]
+
{{#set: left-end-position=196253}}
** '''10''' reactions found over '''11''' reactions in the full pathway
+
{{#set: centisome-position=33.681267   }}
* [[PWY-7769]]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
* [[PWY-6322]]
 
** '''2''' reactions found over '''25''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=67687}}
 
{{#set: left-end-position=62093}}
 
{{#set: centisome-position=65.74932   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Revision as of 09:26, 27 August 2019

Gene SJ22256

  • transcription-direction:
    • positive
  • right-end-position:
    • 208842
  • left-end-position:
    • 196253
  • centisome-position:
    • 33.681267

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1001
    • 1 reactions found over 1 reactions in the full pathway