Difference between revisions of "SJ09999"
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(Created page with "Category:gene == Gene SJ13845 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * RXN-10745 ** Category:...") |
(Created page with "Category:gene == Gene SJ01234 == * transcription-direction: ** negative * right-end-position: ** 248214 * left-end-position: ** 236690 * centisome-position: ** 42.771072...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ01234 == |
| + | * transcription-direction: | ||
| + | ** negative | ||
| + | * right-end-position: | ||
| + | ** 248214 | ||
| + | * left-end-position: | ||
| + | ** 236690 | ||
| + | * centisome-position: | ||
| + | ** 42.771072 | ||
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[GPPSYN-RXN]] |
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-14929]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-2541]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
| + | * [[PWY-6383]] | ||
| + | ** '''2''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-7410]] | ||
| + | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7102]] | ||
| + | ** '''3''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-6859]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7736]] | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-5122]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-7141]] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-7659]] | ||
| + | ** '''1''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-7709]] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-5123]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7182]] | ||
| + | ** '''1''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-7436]] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-1422]] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
| + | </div> | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=248214}} | ||
| + | {{#set: left-end-position=236690}} | ||
| + | {{#set: centisome-position=42.771072 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=13}} | ||
Revision as of 18:49, 14 January 2021
Contents
Gene SJ01234
- transcription-direction:
- negative
- right-end-position:
- 248214
- left-end-position:
- 236690
- centisome-position:
- 42.771072
Organism(s) associated with this gene
Reaction(s) associated
- GPPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-14929
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-2541
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-6383
- 2 reactions found over 5 reactions in the full pathway
- PWY-7410
- 1 reactions found over 4 reactions in the full pathway
- PWY-7102
- 3 reactions found over 6 reactions in the full pathway
- PWY-6859
- 3 reactions found over 4 reactions in the full pathway
- PWY-7736
- 3 reactions found over 8 reactions in the full pathway
- PWY-5122
- 1 reactions found over 1 reactions in the full pathway
- PWY-7141
- 1 reactions found over 2 reactions in the full pathway
- PWY-7659
- 1 reactions found over 9 reactions in the full pathway
- PWY-7709
- 1 reactions found over 2 reactions in the full pathway
- PWY-5123
- 3 reactions found over 3 reactions in the full pathway
- PWY-7182
- 1 reactions found over 2 reactions in the full pathway
- PWY-7436
- 4 reactions found over 6 reactions in the full pathway
- PWY-1422
- 5 reactions found over 7 reactions in the full pathway
