Difference between revisions of "SJ10028"

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(Created page with "Category:gene == Gene SJ00407 == * transcription-direction: ** positive * right-end-position: ** 36681 * left-end-position: ** 20437 * centisome-position: ** 3.5989377...")
(Created page with "Category:gene == Gene SJ10028 == * transcription-direction: ** positive * right-end-position: ** 22637 * left-end-position: ** 21738 * centisome-position: ** 64.33455...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00407 ==
+
== Gene SJ10028 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 36681
+
** 22637
 
* left-end-position:
 
* left-end-position:
−
** 20437
+
** 21738
 
* centisome-position:
 
* centisome-position:
−
** 3.5989377    
+
** 64.33455    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[1.5.1.20-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3-HYDROXYBUTYRATE-DEHYDROGENASE-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[ESTRADIOL-17-BETA-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[HBNOm]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MTHFO]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[MTHFO_LPAREN_nadp_RPAREN_]]
+
* [[RETINOL-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12581]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17728]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
* [[TESTOSTERONE-17-BETA-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[1CMET2-PWY]]
+
* [[PWY66-368]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-3841]]
+
* [[PWY66-367]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-2201]]
+
* [[PWY66-380]]
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[CODH-PWY]]
+
* [[PWY-6872]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7782]]
 +
** '''11''' reactions found over '''16''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=36681}}
+
{{#set: right-end-position=22637}}
−
{{#set: left-end-position=20437}}
+
{{#set: left-end-position=21738}}
−
{{#set: centisome-position=3.5989377   }}
+
{{#set: centisome-position=64.33455   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=7}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:08, 18 March 2021

Gene SJ10028

  • transcription-direction:
    • positive
  • right-end-position:
    • 22637
  • left-end-position:
    • 21738
  • centisome-position:
    • 64.33455

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-368
    • 2 reactions found over 3 reactions in the full pathway
  • PWY66-367
    • 4 reactions found over 5 reactions in the full pathway
  • PWY66-380
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6872
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7782
    • 11 reactions found over 16 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10028&oldid=135458"