Difference between revisions of "SJ10028"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ00407 == * transcription-direction: ** positive * right-end-position: ** 36681 * left-end-position: ** 20437 * centisome-position: ** 3.5989377...")
(Created page with "Category:gene == Gene SJ11123 == * transcription-direction: ** negative * right-end-position: ** 76306 * left-end-position: ** 73059 * centisome-position: ** 19.253769...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ00407 ==
+
== Gene SJ11123 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 36681
+
** 76306
 
* left-end-position:
 
* left-end-position:
** 20437
+
** 73059
 
* centisome-position:
 
* centisome-position:
** 3.5989377    
+
** 19.253769    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[1.5.1.20-RXN]]
+
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[MTHFO]]
+
{{#set: transcription-direction=negative}}
** Category: [[orthology]]
+
{{#set: right-end-position=76306}}
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
{{#set: left-end-position=73059}}
* [[MTHFO_LPAREN_nadp_RPAREN_]]
+
{{#set: centisome-position=19.253769   }}
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[1CMET2-PWY]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-3841]]
 
** '''9''' reactions found over '''11''' reactions in the full pathway
 
* [[PWY-2201]]
 
** '''9''' reactions found over '''12''' reactions in the full pathway
 
* [[CODH-PWY]]
 
** '''4''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=36681}}
 
{{#set: left-end-position=20437}}
 
{{#set: centisome-position=3.5989377   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
 

Revision as of 09:26, 27 August 2019

Gene SJ11123

  • transcription-direction:
    • negative
  • right-end-position:
    • 76306
  • left-end-position:
    • 73059
  • centisome-position:
    • 19.253769

Organism(s) associated with this gene

Reaction(s) associated