Difference between revisions of "SJ10030"

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(Created page with "Category:gene == Gene SJ12991 == * transcription-direction: ** negative * right-end-position: ** 568486 * left-end-position: ** 559079 * centisome-position: ** 75.4738...")
(Created page with "Category:gene == Gene SJ12275 == * transcription-direction: ** positive * right-end-position: ** 271751 * left-end-position: ** 267195 * centisome-position: ** 74.19446...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12991 ==
+
== Gene SJ12275 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 568486
+
** 271751
 
* left-end-position:
 
* left-end-position:
−
** 559079
+
** 267195
 
* centisome-position:
 
* centisome-position:
−
** 75.4738    
+
** 74.19446    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[FORMATETHFLIG-RXN]]
+
* [[3.2.2.23-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[4.2.99.18-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[METHENYLTHFCYCLOHYDRO-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[METHYLENETHFDEHYDROG-NADP-RXN]]
+
* [[RXN0-2601]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
{{#set: right-end-position=271751}}
−
* [[PWY-2161]]
+
{{#set: left-end-position=267195}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=74.19446   }}
−
* [[PWY-2201]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-1722]]
 
−
** '''3''' reactions found over '''3''' reactions in the full pathway
 
−
* [[CODH-PWY]]
 
−
** '''4''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-3841]]
 
−
** '''9''' reactions found over '''11''' reactions in the full pathway
 
−
* [[1CMET2-PWY]]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[P164-PWY]]
 
−
** '''6''' reactions found over '''17''' reactions in the full pathway
 
−
* [[PWY-5030]]
 
−
** '''3''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7909]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6613]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=568486}}
 
−
{{#set: left-end-position=559079}}
 
−
{{#set: centisome-position=75.4738   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=3}}
 
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=11}}
 

Revision as of 15:23, 5 January 2021

Gene SJ12275

  • transcription-direction:
    • positive
  • right-end-position:
    • 271751
  • left-end-position:
    • 267195
  • centisome-position:
    • 74.19446

Organism(s) associated with this gene

Reaction(s) associated




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