Difference between revisions of "SJ10087"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXY-FERULIC-ACID 5-HYDROXY-FERULIC-ACID] == * common-name: ** 5-hydroxyferulate * smiles:...")
 
(Created page with "Category:gene == Gene SJ10087 == * transcription-direction: ** positive * right-end-position: ** 17477 * left-end-position: ** 3434 * centisome-position: ** 10.261160...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=5-HYDROXY-FERULIC-ACID 5-HYDROXY-FERULIC-ACID] ==
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== Gene SJ10087 ==
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* common-name:
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* transcription-direction:
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** 5-hydroxyferulate
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** positive
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* smiles:
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* right-end-position:
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** coc1(c=c(c=cc([o-])=o)c=c(o)c(o)=1)
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** 17477
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* inchi-key:
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* left-end-position:
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** yfxwtvldsksylw-nscuhmnnsa-m
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** 3434
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* molecular-weight:
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* centisome-position:
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** 209.178
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** 10.261160   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-3422]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-1121]]
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* [[DIHYDLIPACETRANS-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=5-hydroxyferulate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=yfxwtvldsksylw-nscuhmnnsa-m}}
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** Category: [[orthology]]
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{{#set: molecular-weight=209.178}}
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[PYRUVDEH-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN0-1133]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[GLYCOLYSIS-TCA-GLYOX-BYPASS]]
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** '''3''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7218]]
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** '''7''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5482]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5537]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6886]]
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** '''8''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7384]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PYRUVDEHYD-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=17477}}
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{{#set: left-end-position=3434}}
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{{#set: centisome-position=10.261160    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=7}}

Latest revision as of 11:03, 18 March 2021

Gene SJ10087

  • transcription-direction:
    • positive
  • right-end-position:
    • 17477
  • left-end-position:
    • 3434
  • centisome-position:
    • 10.261160

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • GLYCOLYSIS-TCA-GLYOX-BYPASS
    • 3 reactions found over 1 reactions in the full pathway
  • PWY-7218
    • 7 reactions found over 4 reactions in the full pathway
  • PWY-5482
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6886
    • 8 reactions found over 5 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PYRUVDEHYD-PWY
    • 3 reactions found over 3 reactions in the full pathway




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