Difference between revisions of "SJ10100"
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(Created page with "Category:gene == Gene SJ14467 == * transcription-direction: ** positive * right-end-position: ** 8639 * left-end-position: ** 1286 * centisome-position: ** 13.352715 =...") |
(Created page with "Category:gene == Gene SJ10100 == * transcription-direction: ** positive * right-end-position: ** 371133 * left-end-position: ** 348566 * centisome-position: ** 87.54179...") |
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[[Category:gene]] | [[Category:gene]] | ||
− | == Gene | + | == Gene SJ10100 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
− | ** | + | ** 371133 |
* left-end-position: | * left-end-position: | ||
− | ** | + | ** 348566 |
* centisome-position: | * centisome-position: | ||
− | ** | + | ** 87.54179 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
− | * [[ | + | * [[GBDP]] |
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[GDPPYPHOSKIN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[ | + | * [[GTPPYPHOSKIN-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | * [[RXN | + | ** Category: [[orthology]] |
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[PPGPPSYN-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
− | + | * [[RXN0-6427]] | |
− | |||
− | |||
− | |||
− | |||
− | |||
− | * [[RXN0- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
− | * [[PWY | + | * [[PPGPPMET-PWY]] |
− | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
− | |||
− | |||
− | |||
− | |||
− | |||
− | |||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
− | {{#set: right-end-position= | + | {{#set: right-end-position=371133}} |
− | {{#set: left-end-position= | + | {{#set: left-end-position=348566}} |
− | {{#set: centisome-position= | + | {{#set: centisome-position=87.54179 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
− | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=5}} |
− | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=1}} |
Latest revision as of 11:09, 18 March 2021
Contents
Gene SJ10100
- transcription-direction:
- positive
- right-end-position:
- 371133
- left-end-position:
- 348566
- centisome-position:
- 87.54179
Organism(s) associated with this gene
Reaction(s) associated
- GBDP
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- GDPPYPHOSKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GTPPYPHOSKIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- PPGPPSYN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-6427
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PPGPPMET-PWY
- 5 reactions found over 6 reactions in the full pathway