Difference between revisions of "SJ10133"

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(Created page with "Category:gene == Gene SJ14641 == * transcription-direction: ** negative * right-end-position: ** 211774 * left-end-position: ** 207091 * centisome-position: ** 66.51945...")
(Created page with "Category:gene == Gene SJ02143 == * transcription-direction: ** negative * right-end-position: ** 67337 * left-end-position: ** 37275 * centisome-position: ** 26.438046...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ14641 ==
+
== Gene SJ02143 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 211774
+
** 67337
 
* left-end-position:
 
* left-end-position:
−
** 207091
+
** 37275
 
* centisome-position:
 
* centisome-position:
−
** 66.51945    
+
** 26.438046    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GSHTRAN-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[KETOGLUTREDUCT-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GST-RXN]]
+
* [[PGLYCDEHYDROG-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROSTAGLANDIN-D-SYNTHASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13673]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
** Category: [[annotation]]
+
* [[PSERTRANSAM-RXN]]
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
** Category: [[orthology]]
−
* [[RXN-15680]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[PSERTRANSAMPYR-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-16701]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6842]]
+
* [[P162-PWY]]
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
** '''7''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-4061]]
+
* [[SERSYN-PWY]]
−
** '''4''' reactions found over '''8''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY66-374]]
+
* [[PYRIDOXSYN-PWY]]
−
** '''2''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7112]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7533]]
 
−
** '''3''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=211774}}
+
{{#set: right-end-position=67337}}
−
{{#set: left-end-position=207091}}
+
{{#set: left-end-position=37275}}
−
{{#set: centisome-position=66.51945   }}
+
{{#set: centisome-position=26.438046   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=3}}

Revision as of 09:26, 27 August 2019

Gene SJ02143

  • transcription-direction:
    • negative
  • right-end-position:
    • 67337
  • left-end-position:
    • 37275
  • centisome-position:
    • 26.438046

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P162-PWY
    • 7 reactions found over 11 reactions in the full pathway
  • SERSYN-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PYRIDOXSYN-PWY
    • 3 reactions found over 7 reactions in the full pathway




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