Difference between revisions of "SJ10233"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] == * common-name:...")
(Created page with "Category:gene == Gene SJ10233 == * transcription-direction: ** negative * right-end-position: ** 177851 * left-end-position: ** 165902 * centisome-position: ** 42.07678...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE PHOSPHORIBOSYL-CARBOXY-AMINOIMIDAZOLE] ==
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== Gene SJ10233 ==
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* common-name:
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* transcription-direction:
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** 5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate
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** negative
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* smiles:
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* right-end-position:
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** c(op([o-])([o-])=o)c2(c(o)c(o)c(n1(c=nc(c([o-])=o)=c(n)1))o2)
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** 177851
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* inchi-key:
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* left-end-position:
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** xfvulmdjzxymsg-ziyngmlesa-k
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** 165902
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* molecular-weight:
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* centisome-position:
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** 336.174
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** 42.07678   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[AIRCARBOXY-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[SAICARSYN-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[AIRCARBOXY-RXN]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=5-amino-1-(5-phospho-d-ribosyl)imidazole-4-carboxylate}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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{{#set: inchi-key=inchikey=xfvulmdjzxymsg-ziyngmlesa-k}}
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** Category: [[annotation]]
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{{#set: molecular-weight=336.174}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-11109]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=177851}}
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{{#set: left-end-position=165902}}
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{{#set: centisome-position=42.07678    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:02, 18 March 2021

Gene SJ10233

  • transcription-direction:
    • negative
  • right-end-position:
    • 177851
  • left-end-position:
    • 165902
  • centisome-position:
    • 42.07678

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10233&oldid=132403"