Difference between revisions of "SJ10244"
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(Created page with "Category:gene == Gene SJ01616 == * transcription-direction: ** negative * right-end-position: ** 103286 * left-end-position: ** 99613 * centisome-position: ** 67.42407...") |
(Created page with "Category:gene == Gene SJ10244 == * transcription-direction: ** positive * right-end-position: ** 62596 * left-end-position: ** 33464 * centisome-position: ** 8.487284...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10244 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 62596 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 33464 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 8.487284 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[3.4.11.2-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN- | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-13677]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | + | ** Category: [[orthology]] | |
| − | + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | |
| − | + | * [[RXN-6642]] | |
| − | |||
| − | ** Category: [[ | ||
| − | *** source: [[ | ||
| − | * [[RXN- | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-7112]] |
| − | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
| − | + | * [[PWY-6842]] | |
| − | + | ** '''5''' reactions found over '''9''' reactions in the full pathway | |
| − | * [[PWY- | + | * [[PWY-4061]] |
| − | ** ''' | + | ** '''4''' reactions found over '''8''' reactions in the full pathway |
| − | * [[PWY- | + | {{#set: transcription-direction=positive}} |
| − | ** ''' | + | {{#set: right-end-position=62596}} |
| − | + | {{#set: left-end-position=33464}} | |
| − | + | {{#set: centisome-position=8.487284 }} | |
| − | |||
| − | |||
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ10244
- transcription-direction:
- positive
- right-end-position:
- 62596
- left-end-position:
- 33464
- centisome-position:
- 8.487284
Organism(s) associated with this gene
Reaction(s) associated
- 3.4.11.2-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-13677
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RXN-6642
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7112
- 3 reactions found over 4 reactions in the full pathway
- PWY-6842
- 5 reactions found over 9 reactions in the full pathway
- PWY-4061
- 4 reactions found over 8 reactions in the full pathway
