Difference between revisions of "SJ10249"
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(Created page with "Category:gene == Gene SJ21764 == * transcription-direction: ** positive * right-end-position: ** 99342 * left-end-position: ** 91281 * centisome-position: ** 48.852295...") |
(Created page with "Category:gene == Gene SJ22508 == * transcription-direction: ** negative * right-end-position: ** 119747 * left-end-position: ** 106768 * centisome-position: ** 60.75062...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ22508 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 119747 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 106768 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 60.75062 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
| − | * [[S. | + | * [[S.japonica_sterols_curated]] |
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[ADDALT-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[ADENODEAMIN-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | * [[RIBOFLAVINSYNDEAM-RXN]] |
| − | {{#set: organism associated=S. | + | ** Category: [[annotation]] |
| − | {{#set: nb reaction associated= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RIBOFLAVINSYNREDUC-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[PWY-7179-1]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7179]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6611]] | ||
| + | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[SALVADEHYPOX-PWY]] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[PWY-6609]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY0-1296]] | ||
| + | ** '''6''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[RIBOSYN2-PWY]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=119747}} | ||
| + | {{#set: left-end-position=106768}} | ||
| + | {{#set: centisome-position=60.75062 }} | ||
| + | {{#set: organism associated=S.japonica_sterols_curated}} | ||
| + | {{#set: nb reaction associated=4}} | ||
| + | {{#set: nb pathway associated=7}} | ||
Revision as of 20:29, 18 December 2020
Contents
Gene SJ22508
- transcription-direction:
- negative
- right-end-position:
- 119747
- left-end-position:
- 106768
- centisome-position:
- 60.75062
Organism(s) associated with this gene
Reaction(s) associated
- ADDALT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ADENODEAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RIBOFLAVINSYNDEAM-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- RIBOFLAVINSYNREDUC-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-7179-1
- 3 reactions found over 3 reactions in the full pathway
- PWY-7179
- 4 reactions found over 4 reactions in the full pathway
- PWY-6611
- 2 reactions found over 3 reactions in the full pathway
- SALVADEHYPOX-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-6609
- 4 reactions found over 4 reactions in the full pathway
- PWY0-1296
- 6 reactions found over 6 reactions in the full pathway
- RIBOSYN2-PWY
- 8 reactions found over 9 reactions in the full pathway
