Difference between revisions of "SJ10346"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-5P PYRIDOXINE-5P] == * common-name: ** pyridoxine 5'-phosphate * smiles: ** cc1(=nc=...")
 
(Created page with "Category:gene == Gene SJ10346 == * transcription-direction: ** positive * right-end-position: ** 10853 * left-end-position: ** 5676 * centisome-position: ** 18.433958...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXINE-5P PYRIDOXINE-5P] ==
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== Gene SJ10346 ==
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* common-name:
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* transcription-direction:
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** pyridoxine 5'-phosphate
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** positive
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* smiles:
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* right-end-position:
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** cc1(=nc=c(cop([o-])(=o)[o-])c(=c(o)1)co)
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** 10853
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* inchi-key:
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* left-end-position:
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** whomfkwhiqzthy-uhfffaoysa-l
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** 5676
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* molecular-weight:
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* centisome-position:
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** 247.144
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** 18.433958   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[PNPOXI-RXN]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-14181]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PNKIN-RXN]]
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* [[FARNESYLTRANSTRANSFERASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=pyridoxine 5'-phosphate}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=whomfkwhiqzthy-uhfffaoysa-l}}
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** Category: [[orthology]]
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{{#set: molecular-weight=247.144}}
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[FPPSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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* [[GGPS]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[GPPS]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[GPPSYN-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-7492]]
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** '''1''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-6659]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7517]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6691]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-7721]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7736]]
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** '''3''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5120]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7720]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6859]]
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** '''3''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-7102]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5123]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6383]]
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** '''2''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7410]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5122]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY-7141]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7659]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7709]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7182]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=10853}}
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{{#set: left-end-position=5676}}
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{{#set: centisome-position=18.433958    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=18}}

Latest revision as of 11:03, 18 March 2021

Gene SJ10346

  • transcription-direction:
    • positive
  • right-end-position:
    • 10853
  • left-end-position:
    • 5676
  • centisome-position:
    • 18.433958

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7492
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6659
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7517
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6691
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7721
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7736
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5120
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7720
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6859
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7102
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5123
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6383
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7410
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5122
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7141
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7659
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7709
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7182
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10346&oldid=132826"