Difference between revisions of "SJ10346"

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(Created page with "Category:gene == Gene SJ04783 == * transcription-direction: ** negative * right-end-position: ** 241368 * left-end-position: ** 222986 * centisome-position: ** 44.12803...")
(Created page with "Category:gene == Gene SJ10346 == * transcription-direction: ** positive * right-end-position: ** 10853 * left-end-position: ** 5676 * centisome-position: ** 18.433958...")
 
(6 intermediate revisions by 3 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04783 ==
+
== Gene SJ10346 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 241368
+
** 10853
 
* left-end-position:
 
* left-end-position:
−
** 222986
+
** 5676
 
* centisome-position:
 
* centisome-position:
−
** 44.12803    
+
** 18.433958    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
* [[ATPASE-RXN]]
+
* [[FARNESYLTRANSTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 19: Line 19:
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPSYN-RXN]]
+
* [[FPPSYN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[GGPS]]
−
* [[RXN-12195]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[GPPS]]
−
* [[RXN-12196]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
* [[GPPSYN-RXN]]
−
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7219]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''4''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-7492]]
−
* [[PWY-6545]]
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6659]]
−
* [[PWY-7210]]
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
* [[PWY-7517]]
−
* [[PWY-7198]]
+
** '''1''' reactions found over '''7''' reactions in the full pathway
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-6691]]
−
* [[PWY-7184]]
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-7721]]
−
{{#set: transcription-direction=negative}}
+
** '''2''' reactions found over '''4''' reactions in the full pathway
−
{{#set: right-end-position=241368}}
+
* [[PWY-7736]]
−
{{#set: left-end-position=222986}}
+
** '''3''' reactions found over '''8''' reactions in the full pathway
−
{{#set: centisome-position=44.12803   }}
+
* [[PWY-5120]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
{{#set: nb reaction associated=6}}
+
* [[PWY-7720]]
−
{{#set: nb pathway associated=5}}
+
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6859]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7102]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5123]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6383]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7410]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5122]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY-7141]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7659]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7709]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7182]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=10853}}
 +
{{#set: left-end-position=5676}}
 +
{{#set: centisome-position=18.433958   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=5}}
 +
{{#set: nb pathway associated=18}}

Latest revision as of 11:03, 18 March 2021

Gene SJ10346

  • transcription-direction:
    • positive
  • right-end-position:
    • 10853
  • left-end-position:
    • 5676
  • centisome-position:
    • 18.433958

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7492
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-6659
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7517
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6691
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-7721
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7736
    • 3 reactions found over 8 reactions in the full pathway
  • PWY-5120
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7720
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6859
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7102
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5123
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-6383
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7410
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5122
    • 1 reactions found over 1 reactions in the full pathway
  • PWY-7141
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7659
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7709
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7182
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10346&oldid=132826"