Difference between revisions of "SJ10347"
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(Created page with "Category:gene == Gene SJ16806 == * transcription-direction: ** positive * right-end-position: ** 125361 * left-end-position: ** 110135 * centisome-position: ** 39.806488...") |
(Created page with "Category:gene == Gene SJ20207 == * transcription-direction: ** negative * right-end-position: ** 141210 * left-end-position: ** 133779 * centisome-position: ** 63.32404...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ20207 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 141210 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 133779 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 63.32404 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | + | * [[PYRNUTRANSHYDROGEN-RXN]] | |
| − | * [[ | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | *** source: [[ | + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[TRANS-RXN0-277]] | ||
| + | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
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| − | |||
| − | |||
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| − | |||
| − | |||
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== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-5083]] |
| − | ** ''' | + | ** '''5''' reactions found over '''6''' reactions in the full pathway |
| − | * [[PWY | + | * [[NADPHOS-DEPHOS-PWY]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[ | + | * [[NADPHOS-DEPHOS-PWY-1]] |
| − | + | ** '''2''' reactions found over '''2''' reactions in the full pathway | |
| − | + | {{#set: transcription-direction=negative}} | |
| − | + | {{#set: right-end-position=141210}} | |
| − | + | {{#set: left-end-position=133779}} | |
| − | ** ''' | + | {{#set: centisome-position=63.32404 }} |
| − | {{#set: transcription-direction= | ||
| − | {{#set: right-end-position= | ||
| − | {{#set: left-end-position= | ||
| − | {{#set: centisome-position= | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=3}} |
Revision as of 18:49, 14 January 2021
Contents
Gene SJ20207
- transcription-direction:
- negative
- right-end-position:
- 141210
- left-end-position:
- 133779
- centisome-position:
- 63.32404
Organism(s) associated with this gene
Reaction(s) associated
- PYRNUTRANSHYDROGEN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- TRANS-RXN0-277
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- PWY-5083
- 5 reactions found over 6 reactions in the full pathway
- NADPHOS-DEPHOS-PWY
- 3 reactions found over 3 reactions in the full pathway
- NADPHOS-DEPHOS-PWY-1
- 2 reactions found over 2 reactions in the full pathway
