Difference between revisions of "SJ10349"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ02472 == * transcription-direction: ** positive * right-end-position: ** 119427 * left-end-position: ** 111931 * centisome-position: ** 82.96286...")
(Created page with "Category:gene == Gene SJ08576 == * transcription-direction: ** negative * right-end-position: ** 237840 * left-end-position: ** 218239 * centisome-position: ** 25.411377...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ02472 ==
+
== Gene SJ08576 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 119427
+
** 237840
 
* left-end-position:
 
* left-end-position:
** 111931
+
** 218239
 
* centisome-position:
 
* centisome-position:
** 82.96286    
+
** 25.411377    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PROTEIN-KINASE-RXN]]
+
* [[2.4.1.155-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[2.4.1.223-RXN]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
{{#set: transcription-direction=positive}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: right-end-position=119427}}
+
== Pathway(s) associated ==
{{#set: left-end-position=111931}}
+
* [[PWY-7426]]
{{#set: centisome-position=82.96286   }}
+
** '''4''' reactions found over '''10''' reactions in the full pathway
{{#set: organism associated=S.japonica_sterols_curated}}
+
* [[PWY-6558]]
{{#set: nb reaction associated=1}}
+
** '''7''' reactions found over '''13''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=237840}}
 +
{{#set: left-end-position=218239}}
 +
{{#set: centisome-position=25.411377   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=2}}

Revision as of 14:44, 5 January 2021

Gene SJ08576

  • transcription-direction:
    • negative
  • right-end-position:
    • 237840
  • left-end-position:
    • 218239
  • centisome-position:
    • 25.411377

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7426
    • 4 reactions found over 10 reactions in the full pathway
  • PWY-6558
    • 7 reactions found over 13 reactions in the full pathway