Difference between revisions of "SJ10416"

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(Created page with "Category:gene == Gene SJ01789 == * transcription-direction: ** negative * right-end-position: ** 82469 * left-end-position: ** 78840 * centisome-position: ** 54.10228...")
 
(Created page with "Category:gene == Gene SJ12149 == * transcription-direction: ** negative * right-end-position: ** 138403 * left-end-position: ** 132273 * centisome-position: ** 36.5864...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ01789 ==
+
== Gene SJ12149 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 82469
+
** 138403
 
* left-end-position:
 
* left-end-position:
−
** 78840
+
** 132273
 
* centisome-position:
 
* centisome-position:
−
** 54.10228    
+
** 36.5864    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ERYTHRULOSE-REDUCTASE-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
* [[L-XYLULOSE-REDUCTASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
* [[RXN-17773]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-15041]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-9524]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9528]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-9536]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6303]]
+
* [[PWY-7786]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6857]]
+
* [[PWY-5525]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5515]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5994]]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 +
* [[PWY-5971]]
 +
** '''31''' reactions found over '''31''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=82469}}
+
{{#set: right-end-position=138403}}
−
{{#set: left-end-position=78840}}
+
{{#set: left-end-position=132273}}
−
{{#set: centisome-position=54.10228   }}
+
{{#set: centisome-position=36.5864   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=6}}
−
{{#set: nb pathway associated=2}}
+
{{#set: nb pathway associated=5}}

Revision as of 14:21, 26 August 2019

Gene SJ12149

  • transcription-direction:
    • negative
  • right-end-position:
    • 138403
  • left-end-position:
    • 132273
  • centisome-position:
    • 36.5864

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7786
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5525
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5515
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5994
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5971
    • 31 reactions found over 31 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10416&oldid=17831"