Difference between revisions of "SJ10493"

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(Created page with "Category:gene == Gene SJ03060 == * transcription-direction: ** positive * right-end-position: ** 124499 * left-end-position: ** 103889 * centisome-position: ** 19.595154...")
(Created page with "Category:gene == Gene SJ10493 == * transcription-direction: ** positive * right-end-position: ** 324933 * left-end-position: ** 321173 * centisome-position: ** 82.587746...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03060 ==
+
== Gene SJ10493 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 124499
+
** 324933
 
* left-end-position:
 
* left-end-position:
−
** 103889
+
** 321173
 
* centisome-position:
 
* centisome-position:
−
** 19.595154    
+
** 82.587746    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[PROTEIN-KINASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.5.1.19-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[3-DEHYDROQUINATE-DEHYDRATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7967]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-7968]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SHIKIMATE-5-DEHYDROGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SHIKIMATE-KINASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6163]]
 +
** '''6''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6707]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[QUINATEDEG-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6416]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6164]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=124499}}
+
{{#set: right-end-position=324933}}
−
{{#set: left-end-position=103889}}
+
{{#set: left-end-position=321173}}
−
{{#set: centisome-position=19.595154   }}
+
{{#set: centisome-position=82.587746   }}
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=7}}
 +
{{#set: nb pathway associated=5}}

Latest revision as of 11:02, 18 March 2021

Gene SJ10493

  • transcription-direction:
    • positive
  • right-end-position:
    • 324933
  • left-end-position:
    • 321173
  • centisome-position:
    • 82.587746

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6163
    • 6 reactions found over 5 reactions in the full pathway
  • PWY-6707
    • 1 reactions found over 3 reactions in the full pathway
  • QUINATEDEG-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6416
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6164
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10493&oldid=132492"