Difference between revisions of "SJ10525"

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(Created page with "Category:gene == Gene SJ07880 == * transcription-direction: ** positive * right-end-position: ** 5213 * left-end-position: ** 3365 * centisome-position: ** 4.197331 ==...")
 
(Created page with "Category:gene == Gene SJ03316 == * transcription-direction: ** positive * right-end-position: ** 429842 * left-end-position: ** 410570 * centisome-position: ** 78.01997...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07880 ==
+
== Gene SJ03316 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 5213
+
** 429842
 
* left-end-position:
 
* left-end-position:
−
** 3365
+
** 410570
 
* centisome-position:
 
* centisome-position:
−
** 4.197331    
+
** 78.01997    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[LIPOXYGENASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1321]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13395]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8497]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-8647]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY66-375]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-5410]]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5409]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-735]]
 +
** '''16''' reactions found over '''19''' reactions in the full pathway
 +
* [[PWY66-392]]
 +
** '''1''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6917]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5406]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5407]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5408]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=5213}}
+
{{#set: right-end-position=429842}}
−
{{#set: left-end-position=3365}}
+
{{#set: left-end-position=410570}}
−
{{#set: centisome-position=4.197331   }}
+
{{#set: centisome-position=78.01997   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=9}}

Revision as of 14:21, 26 August 2019

Gene SJ03316

  • transcription-direction:
    • positive
  • right-end-position:
    • 429842
  • left-end-position:
    • 410570
  • centisome-position:
    • 78.01997

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY66-375
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5410
    • 2 reactions found over 9 reactions in the full pathway
  • PWY-5409
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-735
    • 16 reactions found over 19 reactions in the full pathway
  • PWY66-392
    • 1 reactions found over 11 reactions in the full pathway
  • PWY-6917
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5406
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5407
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-5408
    • 1 reactions found over 4 reactions in the full pathway




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