Difference between revisions of "SJ10594"

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(Created page with "Category:gene == Gene SJ03217 == * transcription-direction: ** positive * right-end-position: ** 65655 * left-end-position: ** 19759 * centisome-position: ** 16.030863...")
(Created page with "Category:gene == Gene SJ00231 == * transcription-direction: ** negative * right-end-position: ** 103812 * left-end-position: ** 89822 * centisome-position: ** 15.766377...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03217 ==
+
== Gene SJ00231 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 65655
+
** 103812
 
* left-end-position:
 
* left-end-position:
−
** 19759
+
** 89822
 
* centisome-position:
 
* centisome-position:
−
** 16.030863    
+
** 15.766377    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[DTDPGLUCDEHYDRAT-RXN]]
−
* [[PEROXID-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14240]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15288]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-17352]]
+
* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8635]]
+
* [[UGDC]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7214]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
* [[PWY-6808]]
−
* [[PWY-7445]]
+
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7657]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-7104]]
 +
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6973]]
 +
** '''1''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-6974]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6976]]
 +
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6953]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7414]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7315]]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5466]]
+
* [[PWY-7318]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6824]]
+
* [[PWY-6942]]
−
** '''2''' reactions found over '''10''' reactions in the full pathway
+
** '''1''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-5469]]
+
* [[PWY-7440]]
−
** '''2''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
−
* [[PWY-5461]]
+
* [[PWY-7814]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
{{#set: transcription-direction=positive}}
+
* [[PWY-3221]]
−
{{#set: right-end-position=65655}}
+
** '''1''' reactions found over '''n.a''' reactions in the full pathway
−
{{#set: left-end-position=19759}}
+
* [[PWY-7413]]
−
{{#set: centisome-position=16.030863   }}
+
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7312]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7316]]
 +
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[DTDPRHAMSYN-PWY]]
 +
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-7688]]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7301]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-4821]]
 +
** '''2''' reactions found over '''1''' reactions in the full pathway
 +
</div>
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=103812}}
 +
{{#set: left-end-position=89822}}
 +
{{#set: centisome-position=15.766377   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=5}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=21}}

Revision as of 11:04, 15 January 2021

Gene SJ00231

  • transcription-direction:
    • negative
  • right-end-position:
    • 103812
  • left-end-position:
    • 89822
  • centisome-position:
    • 15.766377

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6808
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-7657
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7104
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6973
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6974
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6976
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-6953
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7414
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7315
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7318
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6942
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7440
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-7814
    • 2 reactions found over 6 reactions in the full pathway
  • PWY-3221
    • 1 reactions found over n.a reactions in the full pathway
  • PWY-7413
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7312
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-7316
    • 1 reactions found over 4 reactions in the full pathway
  • DTDPRHAMSYN-PWY
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-7688
    • 1 reactions found over 6 reactions in the full pathway
  • PWY-7301
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-4821
    • 2 reactions found over 1 reactions in the full pathway




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