Difference between revisions of "SJ10594"

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(Created page with "Category:gene == Gene SJ00231 == * transcription-direction: ** negative * right-end-position: ** 103812 * left-end-position: ** 89822 * centisome-position: ** 15.766377...")
(Created page with "Category:gene == Gene SJ10594 == * transcription-direction: ** positive * right-end-position: ** 270361 * left-end-position: ** 265809 * centisome-position: ** 68.487...")
 
(One intermediate revision by one other user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00231 ==
+
== Gene SJ10594 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 103812
+
** 270361
 
* left-end-position:
 
* left-end-position:
−
** 89822
+
** 265809
 
* centisome-position:
 
* centisome-position:
−
** 15.766377    
+
** 68.487    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DTDPGLUCDEHYDRAT-RXN]]
+
* [[2.7.1.68-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UDP-GLUCURONATE-DECARBOXYLASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[UGDC]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-6352]]
−
* [[PWY-6808]]
+
** '''5''' reactions found over '''8''' reactions in the full pathway
−
** '''1''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY-6351]]
−
* [[PWY-7657]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
−
* [[PWY-7104]]
+
{{#set: right-end-position=270361}}
−
** '''1''' reactions found over '''8''' reactions in the full pathway
+
{{#set: left-end-position=265809}}
−
* [[PWY-6973]]
+
{{#set: centisome-position=68.487   }}
−
** '''1''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6974]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6976]]
 
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6953]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7414]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7315]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7318]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-6942]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7440]]
 
−
** '''1''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7814]]
 
−
** '''2''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-3221]]
 
−
** '''1''' reactions found over '''n.a''' reactions in the full pathway
 
−
* [[PWY-7413]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7312]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7316]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
* [[DTDPRHAMSYN-PWY]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7688]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7301]]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-4821]]
 
−
** '''2''' reactions found over '''1''' reactions in the full pathway
 
−
</div>
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=103812}}
 
−
{{#set: left-end-position=89822}}
 
−
{{#set: centisome-position=15.766377   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=21}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:03, 18 March 2021

Gene SJ10594

  • transcription-direction:
    • positive
  • right-end-position:
    • 270361
  • left-end-position:
    • 265809
  • centisome-position:
    • 68.487

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6352
    • 5 reactions found over 8 reactions in the full pathway
  • PWY-6351
    • 4 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10594&oldid=132770"