Difference between revisions of "SJ10598"

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(Created page with "Category:gene == Gene SJ11349 == == Organism(s) associated with this gene == * S.japonica_sterols_curated == Reaction(s) associated == <div class="toccolours mw-colla...")
(Created page with "Category:gene == Gene SJ10598 == * transcription-direction: ** positive * right-end-position: ** 337627 * left-end-position: ** 334468 * centisome-position: ** 86.17733...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ11349 ==
+
== Gene SJ10598 ==
 +
* transcription-direction:
 +
** positive
 +
* right-end-position:
 +
** 337627
 +
* left-end-position:
 +
** 334468
 +
* centisome-position:
 +
** 86.17733   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ADCPT]]
* [[1.14.13.78-RXN]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
* [[RXN-1121]]
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* [[DEPHOSPHOCOAKIN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RXN-12510]]
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* [[PANTEPADENYLYLTRAN-RXN]]
** Category: [[orthology]]
+
** Category: [[annotation]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-3661]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-5242]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7580]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7651]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
* [[TRANS-CINNAMATE-4-MONOOXYGENASE-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5047]]
+
* [[COA-PWY]]
** '''6''' reactions found over '''15''' reactions in the full pathway
+
** '''4''' reactions found over '''4''' reactions in the full pathway
* [[PWY-5034]]
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* [[PWY-7851]]
** '''6''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-2181]]
 
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
* [[PWY-3101]]
+
{{#set: transcription-direction=positive}}
** '''4''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=337627}}
* [[PWY-5640]]
+
{{#set: left-end-position=334468}}
** '''1''' reactions found over '''1''' reactions in the full pathway
+
{{#set: centisome-position=86.17733    }}
* [[PWY-5060]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
** '''1''' reactions found over '''6''' reactions in the full pathway
+
{{#set: nb reaction associated=3}}
* [[PWY1F-467]]
+
{{#set: nb pathway associated=2}}
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-1121]]
 
** '''9''' reactions found over '''19''' reactions in the full pathway
 
{{#set: organism associated=S.japonica_sterols_curated}}
 
{{#set: nb reaction associated=8}}
 
{{#set: nb pathway associated=8}}
 

Latest revision as of 11:09, 18 March 2021

Gene SJ10598

  • transcription-direction:
    • positive
  • right-end-position:
    • 337627
  • left-end-position:
    • 334468
  • centisome-position:
    • 86.17733

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • COA-PWY
    • 4 reactions found over 4 reactions in the full pathway
  • PWY-7851
    • 3 reactions found over 4 reactions in the full pathway