Difference between revisions of "SJ10614"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=T2-DECENOYL-COA T2-DECENOYL-COA] == * common-name: ** (2e)-dec-2-enoyl-coa * smiles: ** ccccccc...")
 
(Created page with "Category:gene == Gene SJ10614 == * transcription-direction: ** negative * right-end-position: ** 154335 * left-end-position: ** 140144 * centisome-position: ** 36.201973...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=T2-DECENOYL-COA T2-DECENOYL-COA] ==
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== Gene SJ10614 ==
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* common-name:
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* transcription-direction:
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** (2e)-dec-2-enoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** cccccccc=cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 154335
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* inchi-key:
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* left-end-position:
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** mgnbgcrqqfmnbm-yjhhllfwsa-j
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** 140144
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* molecular-weight:
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* centisome-position:
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** 915.738
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** 36.201973   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ECOAH4h]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-13616]]
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== Reaction(s) associated ==
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* [[RXN-14805]]
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* [[MONOPHENOL-MONOOXYGENASE-RXN]]
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* [[TRANS-2-ENOYL-COA-REDUCTASE-NAD+-RXN-CPD-10267/NAD//T2-DECENOYL-COA/NADH/PROTON.43.]]
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** Category: [[annotation]]
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* [[TRANSENOYLCOARED-RXN-CPD-10267/NADP//T2-DECENOYL-COA/NADPH/PROTON.45.]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) known to produce the compound ==
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** Category: [[orthology]]
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* [[DIENOYLCOAREDUCT-RXN]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[ECOAH4h]]
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* [[RXN-13061]]
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* [[RXN-13615]]
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** Category: [[annotation]]
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* [[RXN-14805]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=(2e)-dec-2-enoyl-coa}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=mgnbgcrqqfmnbm-yjhhllfwsa-j}}
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* [[RXN-5861]]
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{{#set: molecular-weight=915.738}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7917]]
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** '''1''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6481]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-5399]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-6955]]
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** '''1''' reactions found over '''27''' reactions in the full pathway
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* [[PWY-6133]]
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** '''2''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-3581]]
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** '''6''' reactions found over '''11''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=154335}}
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{{#set: left-end-position=140144}}
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{{#set: centisome-position=36.201973    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=3}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:03, 18 March 2021

Gene SJ10614

  • transcription-direction:
    • negative
  • right-end-position:
    • 154335
  • left-end-position:
    • 140144
  • centisome-position:
    • 36.201973

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7917
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6481
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-5399
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-6955
    • 1 reactions found over 27 reactions in the full pathway
  • PWY-6133
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-3581
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ10614&oldid=132882"