Difference between revisions of "SJ10621"
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(Created page with "Category:gene == Gene SJ11654 == * transcription-direction: ** positive * right-end-position: ** 633557 * left-end-position: ** 631865 * centisome-position: ** 81.073296...") |
(Created page with "Category:gene == Gene SJ10621 == * transcription-direction: ** negative * right-end-position: ** 322269 * left-end-position: ** 305442 * centisome-position: ** 78.901726...") |
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[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ10621 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 322269 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 305442 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 78.901726 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[GLUTAMATE-DEHYDROGENASE-RXN]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[GLUTDEHYD-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | == Pathway(s) associated == |
| − | {{#set: right-end-position= | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| − | {{#set: left-end-position= | + | * [[GLUTAMATE-DEG1-PWY]] |
| − | {{#set: centisome-position= | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| + | * [[ALACAT2-PWY]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-5022]] | ||
| + | ** '''3''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7126]] | ||
| + | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-6728]] | ||
| + | ** '''11''' reactions found over '''19''' reactions in the full pathway | ||
| + | * [[P162-PWY]] | ||
| + | ** '''7''' reactions found over '''10''' reactions in the full pathway | ||
| + | * [[GLUTSYNIII-PWY]] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
| + | * [[PWY-5675]] | ||
| + | ** '''4''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY490-3]] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-5913]] | ||
| + | ** '''10''' reactions found over '''8''' reactions in the full pathway | ||
| + | </div> | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=322269}} | ||
| + | {{#set: left-end-position=305442}} | ||
| + | {{#set: centisome-position=78.901726 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=2}} |
| + | {{#set: nb pathway associated=10}} | ||
Latest revision as of 11:04, 18 March 2021
Contents
Gene SJ10621
- transcription-direction:
- negative
- right-end-position:
- 322269
- left-end-position:
- 305442
- centisome-position:
- 78.901726
Organism(s) associated with this gene
Reaction(s) associated
- GLUTAMATE-DEHYDROGENASE-RXN
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- GLUTDEHYD-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- GLUTAMATE-DEG1-PWY
- 1 reactions found over 1 reactions in the full pathway
- ALACAT2-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-5022
- 3 reactions found over 7 reactions in the full pathway
- PWY-7126
- 1 reactions found over 3 reactions in the full pathway
- PWY-6728
- 11 reactions found over 19 reactions in the full pathway
- P162-PWY
- 7 reactions found over 10 reactions in the full pathway
- GLUTSYNIII-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-5675
- 4 reactions found over 4 reactions in the full pathway
- PWY490-3
- 3 reactions found over 4 reactions in the full pathway
- PWY-5913
- 10 reactions found over 8 reactions in the full pathway
