Difference between revisions of "SJ10622"

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(Created page with "Category:gene == Gene SJ08123 == * transcription-direction: ** positive * right-end-position: ** 52004 * left-end-position: ** 43180 * centisome-position: ** 9.700188...")
(Created page with "Category:gene == Gene SJ10622 == * transcription-direction: ** positive * right-end-position: ** 337323 * left-end-position: ** 322818 * centisome-position: ** 83.3903...")
 
(8 intermediate revisions by 4 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ08123 ==
+
== Gene SJ10622 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
** 52004
+
** 337323
 
* left-end-position:
 
* left-end-position:
** 43180
+
** 322818
 
* centisome-position:
 
* centisome-position:
** 9.700188    
+
** 83.3903    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[PMPOXI-RXN]]
+
* [[2.7.7.60-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
Line 18: Line 18:
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[PNPOXI-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[PYRIDOXINE-4-OXIDASE-RXN]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PLPSAL-PWY]]
+
* [[PWY-7560]]
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PWY-7204]]
+
* [[NONMEVIPP-PWY]]
 
** '''9''' reactions found over '''9''' reactions in the full pathway
 
** '''9''' reactions found over '''9''' reactions in the full pathway
* [[PYRIDOXSYN-PWY]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
* [[PWY-7282]]
 
** '''6''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-5499]]
 
** '''1''' reactions found over '''9''' reactions in the full pathway
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
{{#set: right-end-position=52004}}
+
{{#set: right-end-position=337323}}
{{#set: left-end-position=43180}}
+
{{#set: left-end-position=322818}}
{{#set: centisome-position=9.700188   }}
+
{{#set: centisome-position=83.3903   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=2}}

Latest revision as of 11:05, 18 March 2021

Gene SJ10622

  • transcription-direction:
    • positive
  • right-end-position:
    • 337323
  • left-end-position:
    • 322818
  • centisome-position:
    • 83.3903

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7560
    • 9 reactions found over 9 reactions in the full pathway
  • NONMEVIPP-PWY
    • 9 reactions found over 9 reactions in the full pathway