Difference between revisions of "SJ10629"
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(Created page with "Category:gene == Gene SJ09811 == * transcription-direction: ** positive * right-end-position: ** 176264 * left-end-position: ** 168992 * centisome-position: ** 41.678978...") |
(Created page with "Category:gene == Gene SJ18136 == * transcription-direction: ** positive * right-end-position: ** 199535 * left-end-position: ** 169115 * centisome-position: ** 67.15603...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ18136 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 199535 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 169115 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 67.15603 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| + | * [[1.1.1.34-RXN]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
* [[ATPASE-RXN]] | * [[ATPASE-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
| Line 28: | Line 31: | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| + | * [[PWY-922]] | ||
| + | ** '''7''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-6174]] | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[PWY-7391]] | ||
| + | ** '''7''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-7524]] | ||
| + | ** '''5''' reactions found over '''8''' reactions in the full pathway | ||
* [[PWY-7210]] | * [[PWY-7210]] | ||
** '''8''' reactions found over '''8''' reactions in the full pathway | ** '''8''' reactions found over '''8''' reactions in the full pathway | ||
| Line 37: | Line 48: | ||
** '''8''' reactions found over '''9''' reactions in the full pathway | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=199535}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=169115}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=67.15603 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=6}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=8}} |
Revision as of 13:05, 14 January 2021
Contents
Gene SJ18136
- transcription-direction:
- positive
- right-end-position:
- 199535
- left-end-position:
- 169115
- centisome-position:
- 67.15603
Organism(s) associated with this gene
Reaction(s) associated
- 1.1.1.34-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- ATPASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- NUCLEOSIDE-TRIPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12195
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-12196
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5462
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-922
- 7 reactions found over 7 reactions in the full pathway
- PWY-6174
- 6 reactions found over 7 reactions in the full pathway
- PWY-7391
- 7 reactions found over 8 reactions in the full pathway
- PWY-7524
- 5 reactions found over 8 reactions in the full pathway
- PWY-7210
- 8 reactions found over 8 reactions in the full pathway
- PWY-7198
- 6 reactions found over 7 reactions in the full pathway
- PWY-7184
- 9 reactions found over 9 reactions in the full pathway
- PWY-6545
- 8 reactions found over 9 reactions in the full pathway
